Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm6434-201ENSMUST00000163316 372 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Mir5624-201ENSMUST00000176635 61 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm24407-201ENSMUST00000177864 141 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm27185-201ENSMUST00000184296 247 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Mir6987-201ENSMUST00000184789 73 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm18699-201ENSMUST00000190713 243 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm18403-201ENSMUST00000192907 529 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC5.56□□□□□ -1.52
Hoxd3P09027 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm43926-201ENSMUST00000203978 430 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm44571-201ENSMUST00000208092 533 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm45432-201ENSMUST00000210391 416 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm6887-201ENSMUST00000080945 482 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm24622-201ENSMUST00000082619 162 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm22229-201ENSMUST00000082987 108 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm37984-201ENSMUST00000191641 3733 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Hoxd3P09027 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.56□□□□□ -1.52
Hoxd3P09027 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Hoxd3P09027 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm37652-201ENSMUST00000195290 2095 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 AC122426.2-201ENSMUST00000216522 2947 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Hoxd3P09027 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm14772-201ENSMUST00000116562 514 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm12447-201ENSMUST00000119110 470 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm6797-201ENSMUST00000119440 512 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm11257-201ENSMUST00000121313 315 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm25505-201ENSMUST00000157220 246 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm26410-201ENSMUST00000157670 261 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm25454-201ENSMUST00000157947 315 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm23258-201ENSMUST00000158319 106 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm16026-205ENSMUST00000162923 641 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm18006-201ENSMUST00000177411 662 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm23191-201ENSMUST00000179147 107 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hoxd3P09027 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm27266-201ENSMUST00000184521 123 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm17833-201ENSMUST00000197629 1065 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm43203-201ENSMUST00000200130 558 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm18469-201ENSMUST00000208850 439 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm45365-201ENSMUST00000209489 256 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm45279-201ENSMUST00000210315 391 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm7786-201ENSMUST00000210494 436 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm18924-201ENSMUST00000211929 316 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 Gm18587-201ENSMUST00000213736 841 ntBASIC5.55□□□□□ -1.52
Hoxd3P09027 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.55□□□□□ -1.52
Hoxd3P09027 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms