Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm7119-201ENSMUST00000221345 695 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm14973-201ENSMUST00000117248 255 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm34294-201ENSMUST00000191912 4263 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm12638-201ENSMUST00000119531 298 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm14991-201ENSMUST00000119913 598 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm13867-201ENSMUST00000120844 395 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm22160-201ENSMUST00000158405 328 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm16456-201ENSMUST00000174431 920 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm10048-201ENSMUST00000194196 372 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm3931-201ENSMUST00000119038 455 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm24751-201ENSMUST00000157844 102 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm23666-201ENSMUST00000158053 116 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Gm5829-201ENSMUST00000191383 351 ntBASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Col6a3E9PWQ3 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 AC130827.1-201ENSMUST00000220476 3850 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm37183-201ENSMUST00000191712 3405 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Mir546-201ENSMUST00000102105 121 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm8200-201ENSMUST00000122390 222 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm3470-201ENSMUST00000160819 420 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm44690-201ENSMUST00000207984 382 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm9616-201ENSMUST00000221154 781 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm10652-201ENSMUST00000199790 2622 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Xpo7-203ENSMUST00000226448 3663 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm25727-201ENSMUST00000104522 131 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm10936-201ENSMUST00000105264 252 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm6027-201ENSMUST00000121467 756 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm10444-201ENSMUST00000126708 148 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Mir128-1-201ENSMUST00000083586 70 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm42975-201ENSMUST00000200612 1491 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Gm43099-201ENSMUST00000198943 5241 ntBASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Col6a3E9PWQ3 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms