Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn3Q9Z0G9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn3Q9Z0G9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cldn3Q9Z0G9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cldn3Q9Z0G9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cldn3Q9Z0G9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldn3Q9Z0G9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Gm10653-202ENSMUST00000139570 835 ntBASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldn3Q9Z0G9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.87■□□□□ 0.45
Cldn3Q9Z0G9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn3Q9Z0G9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms