Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Lhx9Q9WUH2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx9Q9WUH2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
Lhx9Q9WUH2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx9Q9WUH2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.83■□□□□ 0.29
Lhx9Q9WUH2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Lhx9Q9WUH2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Mir6349-201ENSMUST00000184059 97 ntBASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Lhx9Q9WUH2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Gm9987-201ENSMUST00000069768 567 ntBASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lhx9Q9WUH2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Gm37292-201ENSMUST00000192062 758 ntBASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lhx9Q9WUH2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm12382-201ENSMUST00000122005 922 ntBASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm21814-202ENSMUST00000203277 873 ntBASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lhx9Q9WUH2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx9Q9WUH2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lhx9Q9WUH2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms