Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scn8aQ9WTU3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scn8aQ9WTU3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Gm9731-201ENSMUST00000209480 747 ntBASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scn8aQ9WTU3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scn8aQ9WTU3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Gm13836-201ENSMUST00000121159 501 ntBASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scn8aQ9WTU3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.83■□□□□ 0.45
Scn8aQ9WTU3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn8aQ9WTU3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scn8aQ9WTU3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Scn8aQ9WTU3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 Grk6-206ENSMUST00000224995 2971 ntBASIC17.82■□□□□ 0.44
Scn8aQ9WTU3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scn8aQ9WTU3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms