Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col13a1Q9R1N9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Col13a1Q9R1N9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col13a1Q9R1N9 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col13a1Q9R1N9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Mir5130-201ENSMUST00000175160 84 ntBASIC15□□□□□ -0.01
Col13a1Q9R1N9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Gm44771-201ENSMUST00000206975 626 ntBASIC15□□□□□ -0.01
Col13a1Q9R1N9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col13a1Q9R1N9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col13a1Q9R1N9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 BC021767-201ENSMUST00000126387 1716 ntBASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Gm17661-201ENSMUST00000170317 270 ntBASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Gm5867-201ENSMUST00000063197 592 ntBASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col13a1Q9R1N9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms