Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Col4a4Q9QZR9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a4Q9QZR9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Col4a4Q9QZR9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.83■□□□□ 0.45
Col4a4Q9QZR9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.83■□□□□ 0.45
Col4a4Q9QZR9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a4Q9QZR9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a4Q9QZR9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a4Q9QZR9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a4Q9QZR9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Tgds-204ENSMUST00000228543 1594 ntBASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Rps4l-201ENSMUST00000071745 943 ntBASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a4Q9QZR9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a4Q9QZR9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Gm11594-201ENSMUST00000122313 162 ntBASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a4Q9QZR9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a4Q9QZR9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col4a4Q9QZR9 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms