Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Shroom3Q9QXN0 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Gm10418-201ENSMUST00000100943 576 ntBASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Mir2861-201ENSMUST00000175539 82 ntBASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Shroom3Q9QXN0 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shroom3Q9QXN0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shroom3Q9QXN0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shroom3Q9QXN0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Gm5417-201ENSMUST00000079706 384 ntBASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms