Protein–RNA interactions for Protein: Q9JK54

Msgn1, Mesogenin-1, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msgn1Q9JK54 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Msgn1Q9JK54 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msgn1Q9JK54 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Msgn1Q9JK54 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
Msgn1Q9JK54 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Msgn1Q9JK54 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.27■□□□□ 0.67
Msgn1Q9JK54 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Gm28033-201ENSMUST00000184224 96 ntBASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.26■□□□□ 0.67
Msgn1Q9JK54 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Msgn1Q9JK54 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Gm11355-201ENSMUST00000121120 306 ntBASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Msgn1Q9JK54 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Msgn1Q9JK54 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Gm10566-201ENSMUST00000086739 996 ntBASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Msgn1Q9JK54 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Gm17807-201ENSMUST00000186869 298 ntBASIC19.22■□□□□ 0.67
Msgn1Q9JK54 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.22■□□□□ 0.67
Msgn1Q9JK54 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msgn1Q9JK54 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msgn1Q9JK54 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msgn1Q9JK54 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Msgn1Q9JK54 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msgn1Q9JK54 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msgn1Q9JK54 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms