Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Gm7791-201ENSMUST00000219066 539 ntBASIC17.61■□□□□ 0.41
OtofQ9ESF1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
OtofQ9ESF1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
OtofQ9ESF1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Gm7367-201ENSMUST00000057611 492 ntBASIC17.6■□□□□ 0.41
OtofQ9ESF1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Gm6345-202ENSMUST00000180900 204 ntBASIC17.6■□□□□ 0.41
OtofQ9ESF1 Gm9731-201ENSMUST00000209480 747 ntBASIC17.6■□□□□ 0.41
OtofQ9ESF1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
OtofQ9ESF1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.59■□□□□ 0.41
OtofQ9ESF1 Gm18958-201ENSMUST00000174258 762 ntBASIC17.59■□□□□ 0.41
OtofQ9ESF1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
OtofQ9ESF1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
OtofQ9ESF1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
OtofQ9ESF1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
OtofQ9ESF1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
OtofQ9ESF1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
OtofQ9ESF1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
OtofQ9ESF1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Gm16061-201ENSMUST00000122167 857 ntBASIC17.58■□□□□ 0.4
OtofQ9ESF1 Gm18101-201ENSMUST00000215769 548 ntBASIC17.58■□□□□ 0.4
OtofQ9ESF1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
OtofQ9ESF1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
OtofQ9ESF1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
OtofQ9ESF1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.57■□□□□ 0.4
OtofQ9ESF1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Mir8112-201ENSMUST00000184382 131 ntBASIC17.57■□□□□ 0.4
OtofQ9ESF1 Gm2274-201ENSMUST00000184539 609 ntBASIC17.57■□□□□ 0.4
OtofQ9ESF1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
OtofQ9ESF1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.56■□□□□ 0.4
OtofQ9ESF1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
OtofQ9ESF1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
OtofQ9ESF1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms