Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lima1Q9ERG0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lima1Q9ERG0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 AV356131-201ENSMUST00000206201 750 ntBASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lima1Q9ERG0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Gm8495-201ENSMUST00000188740 694 ntBASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Gm7514-201ENSMUST00000209475 934 ntBASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lima1Q9ERG0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lima1Q9ERG0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Lima1Q9ERG0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Gm10849-201ENSMUST00000100397 618 ntBASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lima1Q9ERG0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms