Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps33aQ9D2N9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps33aQ9D2N9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps33aQ9D2N9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Vps33aQ9D2N9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps33aQ9D2N9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps33aQ9D2N9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps33aQ9D2N9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps33aQ9D2N9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps33aQ9D2N9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps33aQ9D2N9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms