Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chaf1bQ9D0N7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chaf1bQ9D0N7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Gm12821-201ENSMUST00000120022 600 ntBASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chaf1bQ9D0N7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Gm9988-201ENSMUST00000069786 435 ntBASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chaf1bQ9D0N7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Chaf1bQ9D0N7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Gm8969-201ENSMUST00000199694 526 ntBASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Gm45417-201ENSMUST00000209533 758 ntBASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chaf1bQ9D0N7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chaf1bQ9D0N7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms