Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Lysmd1Q9D0E3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Lysmd1Q9D0E3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lysmd1Q9D0E3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Lysmd1Q9D0E3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44357-201ENSMUST00000195897 142 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm19658-201ENSMUST00000196231 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44367-201ENSMUST00000196836 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44350-201ENSMUST00000197197 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44390-201ENSMUST00000197533 144 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44313-201ENSMUST00000198018 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44486-201ENSMUST00000198508 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44454-201ENSMUST00000198541 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44314-201ENSMUST00000199263 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44394-201ENSMUST00000199558 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44484-201ENSMUST00000199873 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44466-201ENSMUST00000200264 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm44359-201ENSMUST00000200671 138 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Lysmd1Q9D0E3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lysmd1Q9D0E3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Gm5745-201ENSMUST00000183748 313 ntBASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lysmd1Q9D0E3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Gm27000-201ENSMUST00000182943 842 ntBASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Gm37025-201ENSMUST00000195159 829 ntBASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.98■□□□□ 0.63
Lysmd1Q9D0E3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lysmd1Q9D0E3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lysmd1Q9D0E3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Lysmd1Q9D0E3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms