Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hdhd3Q9CYW4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hdhd3Q9CYW4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Hdhd3Q9CYW4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hdhd3Q9CYW4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Hdhd3Q9CYW4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hdhd3Q9CYW4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms