Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ddx47Q9CWX9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ddx47Q9CWX9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Mir7075-201ENSMUST00000184187 82 ntBASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ddx47Q9CWX9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ddx47Q9CWX9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ddx47Q9CWX9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ddx47Q9CWX9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ddx47Q9CWX9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms