Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Gm5867-201ENSMUST00000063197 592 ntBASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldnd1Q9CQX5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cldnd1Q9CQX5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Gm27742-201ENSMUST00000184667 60 ntBASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Gm18115-201ENSMUST00000221209 621 ntBASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Il3ra-202ENSMUST00000223589 738 ntBASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldnd1Q9CQX5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Gm37025-201ENSMUST00000195159 829 ntBASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Gm43514-201ENSMUST00000198852 424 ntBASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldnd1Q9CQX5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldnd1Q9CQX5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Gm10566-201ENSMUST00000086739 996 ntBASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cldnd1Q9CQX5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 Gm6443-201ENSMUST00000203599 874 ntBASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldnd1Q9CQX5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cldnd1Q9CQX5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldnd1Q9CQX5 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.08■□□□□ 0.49
Cldnd1Q9CQX5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cldnd1Q9CQX5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.08■□□□□ 0.49
Cldnd1Q9CQX5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldnd1Q9CQX5 Mir770-201ENSMUST00000103252 94 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms