Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim11Q99PQ2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Trim11Q99PQ2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Trim11Q99PQ2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim11Q99PQ2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim11Q99PQ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Gm10418-201ENSMUST00000100943 576 ntBASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Gm11927-201ENSMUST00000118472 759 ntBASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim11Q99PQ2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Gm29791-202ENSMUST00000207888 369 ntBASIC20.12■□□□□ 0.81
Trim11Q99PQ2 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim11Q99PQ2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms