Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim16Q99PP9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.32■□□□□ 0.36
Trim16Q99PP9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim16Q99PP9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim16Q99PP9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.31■□□□□ 0.36
Trim16Q99PP9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim16Q99PP9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.3■□□□□ 0.36
Trim16Q99PP9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim16Q99PP9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.29■□□□□ 0.36
Trim16Q99PP9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.29■□□□□ 0.36
Trim16Q99PP9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim16Q99PP9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.29■□□□□ 0.36
Trim16Q99PP9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim16Q99PP9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Rab3c-203ENSMUST00000224180 967 ntBASIC17.28■□□□□ 0.36
Trim16Q99PP9 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.28■□□□□ 0.36
Trim16Q99PP9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.28■□□□□ 0.36
Trim16Q99PP9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.28■□□□□ 0.36
Trim16Q99PP9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim16Q99PP9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
Trim16Q99PP9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim16Q99PP9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim16Q99PP9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.27■□□□□ 0.36
Trim16Q99PP9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms