Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
Trim34aQ99PP6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim34aQ99PP6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Notumos-201ENSMUST00000151998 2659 ntBASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim34aQ99PP6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim34aQ99PP6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim34aQ99PP6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim34aQ99PP6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Trim34aQ99PP6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim34aQ99PP6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Gm25016-201ENSMUST00000158399 131 ntBASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim34aQ99PP6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Trim34aQ99PP6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms