Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Idnk-204ENSMUST00000226010 1898 ntBASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim8Q99PJ2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim8Q99PJ2 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.34■□□□□ 0.37
Trim8Q99PJ2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim8Q99PJ2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Gm10493-201ENSMUST00000097270 612 ntBASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim8Q99PJ2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim8Q99PJ2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim8Q99PJ2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim8Q99PJ2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim8Q99PJ2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim8Q99PJ2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim8Q99PJ2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim8Q99PJ2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim8Q99PJ2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim8Q99PJ2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim8Q99PJ2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms