Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm11452-201ENSMUST00000122376 690 ntBASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Gm27742-201ENSMUST00000184667 60 ntBASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Gm8000-201ENSMUST00000188378 592 ntBASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col25a1Q99MQ5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Col25a1Q99MQ5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col25a1Q99MQ5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Col25a1Q99MQ5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col25a1Q99MQ5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.33■□□□□ 0.53
Col25a1Q99MQ5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col25a1Q99MQ5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 Gm43575-201ENSMUST00000196420 516 ntBASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.33■□□□□ 0.52
Col25a1Q99MQ5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Gm11950-201ENSMUST00000121615 838 ntBASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col25a1Q99MQ5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Gm43347-201ENSMUST00000200226 580 ntBASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Col25a1Q99MQ5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Gm6736-201ENSMUST00000166583 948 ntBASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 Golph3-205ENSMUST00000228671 2842 ntBASIC18.3■□□□□ 0.52
Col25a1Q99MQ5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.29■□□□□ 0.52
Col25a1Q99MQ5 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Col25a1Q99MQ5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.27■□□□□ 0.52
Col25a1Q99MQ5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms