Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Gm7290-201ENSMUST00000104990 617 ntBASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Gm12918-201ENSMUST00000120234 636 ntBASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Gm15710-201ENSMUST00000121821 636 ntBASIC17.18■□□□□ 0.34
Rnf111Q99ML9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Gm5075-201ENSMUST00000196916 622 ntBASIC17.18■□□□□ 0.34
Rnf111Q99ML9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf111Q99ML9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Gm6211-202ENSMUST00000167849 925 ntBASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf111Q99ML9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf111Q99ML9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf111Q99ML9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Rnf111Q99ML9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf111Q99ML9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rnf111Q99ML9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf111Q99ML9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf111Q99ML9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms