Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Nkx6-1Q99MA9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nkx6-1Q99MA9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nkx6-1Q99MA9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nkx6-1Q99MA9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nkx6-1Q99MA9 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nkx6-1Q99MA9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx6-1Q99MA9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nkx6-1Q99MA9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx6-1Q99MA9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Nkx6-1Q99MA9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx6-1Q99MA9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nkx6-1Q99MA9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx6-1Q99MA9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx6-1Q99MA9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx6-1Q99MA9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nkx6-1Q99MA9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms