Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdk5rap3Q99LM2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap3Q99LM2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdk5rap3Q99LM2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdk5rap3Q99LM2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap3Q99LM2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap3Q99LM2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap3Q99LM2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.33■□□□□ 0.53
Cdk5rap3Q99LM2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap3Q99LM2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdk5rap3Q99LM2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdk5rap3Q99LM2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdk5rap3Q99LM2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Gm7291-201ENSMUST00000199147 382 ntBASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdk5rap3Q99LM2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdk5rap3Q99LM2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms