Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hps4Q99KG7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.8■□□□□ 0.92
Hps4Q99KG7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Gm18032-201ENSMUST00000222541 538 ntBASIC20.8■□□□□ 0.92
Hps4Q99KG7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.8■□□□□ 0.92
Hps4Q99KG7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Hps4Q99KG7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.79■□□□□ 0.92
Hps4Q99KG7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Gm7638-201ENSMUST00000121348 967 ntBASIC20.79■□□□□ 0.92
Hps4Q99KG7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.79■□□□□ 0.92
Hps4Q99KG7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hps4Q99KG7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hps4Q99KG7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hps4Q99KG7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
Hps4Q99KG7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hps4Q99KG7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hps4Q99KG7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Gm10013-201ENSMUST00000106074 672 ntBASIC20.75■□□□□ 0.91
Hps4Q99KG7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Gm23634-201ENSMUST00000175071 91 ntBASIC20.75■□□□□ 0.91
Hps4Q99KG7 Gm7791-201ENSMUST00000219066 539 ntBASIC20.75■□□□□ 0.91
Hps4Q99KG7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hps4Q99KG7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps4Q99KG7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hps4Q99KG7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms