Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.9■□□□□ 0.46
Smarcd2Q99JR8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
Smarcd2Q99JR8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Gm27741-201ENSMUST00000185060 237 ntBASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.89■□□□□ 0.45
Smarcd2Q99JR8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Ank2-226ENSMUST00000189368 339 ntBASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smarcd2Q99JR8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Gm9103-201ENSMUST00000119371 405 ntBASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Gm17661-201ENSMUST00000170317 270 ntBASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smarcd2Q99JR8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Mir1668-201ENSMUST00000184114 107 ntBASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Gm37025-201ENSMUST00000195159 829 ntBASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smarcd2Q99JR8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Gm7284-201ENSMUST00000131667 944 ntBASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.85■□□□□ 0.45
Smarcd2Q99JR8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Smarcd2Q99JR8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms