Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm43017-201ENSMUST00000198296 752 ntBASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Gm9988-201ENSMUST00000069786 435 ntBASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Thumpd1Q99J36 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Thumpd1Q99J36 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Thumpd1Q99J36 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Thumpd1Q99J36 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Reep4-203ENSMUST00000226563 1444 ntBASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Thumpd1Q99J36 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thumpd1Q99J36 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Thumpd1Q99J36 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thumpd1Q99J36 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Thumpd1Q99J36 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.77■□□□□ 0.12
Thumpd1Q99J36 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.77■□□□□ 0.12
Thumpd1Q99J36 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Thumpd1Q99J36 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms