Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Prdm9Q96EQ9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Prdm9Q96EQ9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Prdm9Q96EQ9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Gm30025-201ENSMUST00000218555 728 ntBASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Prdm9Q96EQ9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Prdm9Q96EQ9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Prdm9Q96EQ9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms