Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col20a1Q923P0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col20a1Q923P0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.91■□□□□ 0.94
Col20a1Q923P0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.91■□□□□ 0.94
Col20a1Q923P0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col20a1Q923P0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col20a1Q923P0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.9■□□□□ 0.94
Col20a1Q923P0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col20a1Q923P0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col20a1Q923P0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Col20a1Q923P0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Col20a1Q923P0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.88■□□□□ 0.93
Col20a1Q923P0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Gm18959-201ENSMUST00000208954 655 ntBASIC20.88■□□□□ 0.93
Col20a1Q923P0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col20a1Q923P0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.87■□□□□ 0.93
Col20a1Q923P0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.87■□□□□ 0.93
Col20a1Q923P0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col20a1Q923P0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Col20a1Q923P0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Col20a1Q923P0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Col20a1Q923P0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms