Protein–RNA interactions for Protein: Q920C4

Ms4a3, Membrane-spanning 4-domains subfamily A member 3, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ms4a3Q920C4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ms4a3Q920C4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ms4a3Q920C4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Gm9987-201ENSMUST00000069768 567 ntBASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ms4a3Q920C4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ms4a3Q920C4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.08■□□□□ 0
Ms4a3Q920C4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Gm15375-201ENSMUST00000119510 849 ntBASIC15.08■□□□□ 0
Ms4a3Q920C4 Mir6349-201ENSMUST00000184059 97 ntBASIC15.08■□□□□ 0
Ms4a3Q920C4 Gm38285-201ENSMUST00000192928 922 ntBASIC15.08■□□□□ 0
Ms4a3Q920C4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.08■□□□□ 0
Ms4a3Q920C4 Gm5417-201ENSMUST00000079706 384 ntBASIC15.08■□□□□ 0
Ms4a3Q920C4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ms4a3Q920C4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.07■□□□□ 0
Ms4a3Q920C4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.07■□□□□ 0
Ms4a3Q920C4 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.07■□□□□ 0
Ms4a3Q920C4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.07■□□□□ 0
Ms4a3Q920C4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ms4a3Q920C4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.06■□□□□ 0
Ms4a3Q920C4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ms4a3Q920C4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ms4a3Q920C4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Gm43183-201ENSMUST00000200632 547 ntBASIC15.06■□□□□ 0
Ms4a3Q920C4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.06■□□□□ 0
Ms4a3Q920C4 Grk6-206ENSMUST00000224995 2971 ntBASIC15.06■□□□□ 0
Ms4a3Q920C4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ms4a3Q920C4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ms4a3Q920C4 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.05■□□□□ 0
Ms4a3Q920C4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ms4a3Q920C4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ms4a3Q920C4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ms4a3Q920C4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ms4a3Q920C4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ms4a3Q920C4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ms4a3Q920C4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.05■□□□□ -0
Ms4a3Q920C4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ms4a3Q920C4 Gm21814-202ENSMUST00000203277 873 ntBASIC15.05■□□□□ -0
Ms4a3Q920C4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ms4a3Q920C4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.05■□□□□ -0
Ms4a3Q920C4 Odf3b-204ENSMUST00000227834 930 ntBASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms