Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb22Q91XZ8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb22Q91XZ8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb22Q91XZ8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Pcdhb22Q91XZ8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb22Q91XZ8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb22Q91XZ8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb22Q91XZ8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Gm10812-201ENSMUST00000099864 546 ntBASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.62■□□□□ 0.89
Pcdhb22Q91XZ8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb22Q91XZ8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb22Q91XZ8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms