Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb4Q91XZ6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Gm6211-202ENSMUST00000167849 925 ntBASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Gm27405-201ENSMUST00000184201 112 ntBASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb4Q91XZ6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb4Q91XZ6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb4Q91XZ6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb4Q91XZ6 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.52■□□□□ 0.39
Pcdhb4Q91XZ6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdhb4Q91XZ6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb4Q91XZ6 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.52■□□□□ 0.39
Pcdhb4Q91XZ6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb4Q91XZ6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms