Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb6Q91XZ4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Pcdhb6Q91XZ4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb6Q91XZ4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb6Q91XZ4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Gm13401-201ENSMUST00000117074 291 ntBASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb6Q91XZ4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb6Q91XZ4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhb6Q91XZ4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Gm29257-201ENSMUST00000186115 639 ntBASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb6Q91XZ4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb6Q91XZ4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms