Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhga11Q91XY8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhga11Q91XY8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhga11Q91XY8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Pcdhga11Q91XY8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhga11Q91XY8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhga11Q91XY8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms