Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga4Q91XY4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pcdhga4Q91XY4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga4Q91XY4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga4Q91XY4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhga4Q91XY4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga4Q91XY4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga4Q91XY4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Gm11249-201ENSMUST00000117071 859 ntBASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Gm10812-201ENSMUST00000099864 546 ntBASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga4Q91XY4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga4Q91XY4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga4Q91XY4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhga4Q91XY4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Gm5643-201ENSMUST00000117081 966 ntBASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Pcdhga4Q91XY4 Fst-202ENSMUST00000223640 2612 ntBASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Zfp783-201ENSMUST00000095946 670 ntBASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga4Q91XY4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Gm11927-201ENSMUST00000118472 759 ntBASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga4Q91XY4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.36■□□□□ 0.37
Pcdhga4Q91XY4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms