Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhgb5Q91XX5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Gm45058-201ENSMUST00000205810 766 ntBASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb5Q91XX5 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Gm6659-201ENSMUST00000174752 547 ntBASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb5Q91XX5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Gm10013-201ENSMUST00000106074 672 ntBASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhgb5Q91XX5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Mir5130-201ENSMUST00000175160 84 ntBASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhgb5Q91XX5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhgb5Q91XX5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhgb5Q91XX5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms