Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.49■□□□□ 0.39
Vsx1Q91V10 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vsx1Q91V10 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.48■□□□□ 0.39
Vsx1Q91V10 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Gm38027-201ENSMUST00000192315 235 ntBASIC17.48■□□□□ 0.39
Vsx1Q91V10 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.48■□□□□ 0.39
Vsx1Q91V10 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vsx1Q91V10 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.47■□□□□ 0.39
Vsx1Q91V10 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.47■□□□□ 0.39
Vsx1Q91V10 Gm27704-201ENSMUST00000185094 107 ntBASIC17.47■□□□□ 0.39
Vsx1Q91V10 Gm44771-201ENSMUST00000206975 626 ntBASIC17.47■□□□□ 0.39
Vsx1Q91V10 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.47■□□□□ 0.39
Vsx1Q91V10 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vsx1Q91V10 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vsx1Q91V10 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.46■□□□□ 0.38
Vsx1Q91V10 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.46■□□□□ 0.38
Vsx1Q91V10 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.45■□□□□ 0.38
Vsx1Q91V10 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.45■□□□□ 0.38
Vsx1Q91V10 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vsx1Q91V10 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vsx1Q91V10 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Vsx1Q91V10 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms