Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.83□□□□□ -0.04
H1fooQ8VIK3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Rab3c-203ENSMUST00000224180 967 ntBASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H1fooQ8VIK3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Gm12933-201ENSMUST00000120203 872 ntBASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.81□□□□□ -0.04
H1fooQ8VIK3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Gm38285-201ENSMUST00000192928 922 ntBASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Gm5408-201ENSMUST00000197998 747 ntBASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H1fooQ8VIK3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.79□□□□□ -0.04
H1fooQ8VIK3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Flg-201ENSMUST00000050758 1488 ntBASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H1fooQ8VIK3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms