Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.83■□□□□ 0.6
TraipQ8VIG6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TraipQ8VIG6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.82■□□□□ 0.6
TraipQ8VIG6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Gm7638-201ENSMUST00000121348 967 ntBASIC18.81■□□□□ 0.6
TraipQ8VIG6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Gm37025-201ENSMUST00000195159 829 ntBASIC18.81■□□□□ 0.6
TraipQ8VIG6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TraipQ8VIG6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Gm18032-201ENSMUST00000222541 538 ntBASIC18.8■□□□□ 0.6
TraipQ8VIG6 Il3ra-202ENSMUST00000223589 738 ntBASIC18.8■□□□□ 0.6
TraipQ8VIG6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TraipQ8VIG6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TraipQ8VIG6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.79■□□□□ 0.6
TraipQ8VIG6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TraipQ8VIG6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.78■□□□□ 0.6
TraipQ8VIG6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Gm6659-201ENSMUST00000174752 547 ntBASIC18.78■□□□□ 0.6
TraipQ8VIG6 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TraipQ8VIG6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.78■□□□□ 0.6
TraipQ8VIG6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TraipQ8VIG6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms