Protein–RNA interactions for Protein: Q8VIG3

Rsph1, Radial spoke head 1 homolog, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph1Q8VIG3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Gm22697-201ENSMUST00000175194 63 ntBASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rsph1Q8VIG3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Gm25016-201ENSMUST00000158399 131 ntBASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Gm9731-201ENSMUST00000209480 747 ntBASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rsph1Q8VIG3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.46■□□□□ 0.54
Rsph1Q8VIG3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rsph1Q8VIG3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Gm7791-201ENSMUST00000219066 539 ntBASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rsph1Q8VIG3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rsph1Q8VIG3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Mir1668-201ENSMUST00000184114 107 ntBASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Gm33142-201ENSMUST00000193913 867 ntBASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rsph1Q8VIG3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms