Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rab40bQ8VHP8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Gm43017-201ENSMUST00000198296 752 ntBASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rab40bQ8VHP8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Gm9988-201ENSMUST00000069786 435 ntBASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Reep4-203ENSMUST00000226563 1444 ntBASIC15.94■□□□□ 0.14
Rab40bQ8VHP8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rab40bQ8VHP8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rab40bQ8VHP8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rab40bQ8VHP8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms