Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkd2Q8VE28 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkd2Q8VE28 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Gm13836-201ENSMUST00000121159 501 ntBASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nkd2Q8VE28 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Fst-202ENSMUST00000223640 2612 ntBASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.11■□□□□ 0.17
Nkd2Q8VE28 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Gm11249-201ENSMUST00000117071 859 ntBASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nkd2Q8VE28 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nkd2Q8VE28 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms