Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndc1Q8VCB1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ndc1Q8VCB1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Ndc1Q8VCB1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Gm15565-201ENSMUST00000118890 427 ntBASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndc1Q8VCB1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Mir5122-201ENSMUST00000175004 89 ntBASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ndc1Q8VCB1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ndc1Q8VCB1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Mir6349-201ENSMUST00000184059 97 ntBASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Gm37292-201ENSMUST00000192062 758 ntBASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ndc1Q8VCB1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.66■□□□□ 0.26
Ndc1Q8VCB1 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms