Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm1Q8VC85 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Gm26524-201ENSMUST00000192339 390 ntBASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm1Q8VC85 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm1Q8VC85 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm1Q8VC85 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.96■□□□□ 0.3
Lsm1Q8VC85 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm1Q8VC85 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm1Q8VC85 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Lsm1Q8VC85 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Gm13148-201ENSMUST00000118892 745 ntBASIC16.95■□□□□ 0.3
Lsm1Q8VC85 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.95■□□□□ 0.3
Lsm1Q8VC85 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lsm1Q8VC85 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lsm1Q8VC85 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Gm8495-201ENSMUST00000188740 694 ntBASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Gm29791-202ENSMUST00000207888 369 ntBASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lsm1Q8VC85 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.93■□□□□ 0.3
Lsm1Q8VC85 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms