Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc9Q8VC31 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc9Q8VC31 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Ccdc9Q8VC31 Gm9870-201ENSMUST00000063874 645 ntBASIC21.31■■□□□ 1
Ccdc9Q8VC31 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc9Q8VC31 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.31■■□□□ 1
Ccdc9Q8VC31 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc9Q8VC31 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc9Q8VC31 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.31■■□□□ 1
Ccdc9Q8VC31 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc9Q8VC31 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc9Q8VC31 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ccdc9Q8VC31 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.3■■□□□ 1
Ccdc9Q8VC31 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.3■■□□□ 1
Ccdc9Q8VC31 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc9Q8VC31 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccdc9Q8VC31 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.28■■□□□ 1
Ccdc9Q8VC31 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ccdc9Q8VC31 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Ccdc9Q8VC31 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc9Q8VC31 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc9Q8VC31 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 Gm26917-202ENSMUST00000192833 3329 ntBASIC21.25■□□□□ 0.99
Ccdc9Q8VC31 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms