Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdt1Q8R4E9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cdt1Q8R4E9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdt1Q8R4E9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Flg-201ENSMUST00000050758 1488 ntBASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdt1Q8R4E9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdt1Q8R4E9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdt1Q8R4E9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdt1Q8R4E9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdt1Q8R4E9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdt1Q8R4E9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdt1Q8R4E9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms