Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm22325-201ENSMUST00000158904 308 ntBASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nudcd3Q8R1N4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nudcd3Q8R1N4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Nudcd3Q8R1N4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.71■□□□□ 0.43
Nudcd3Q8R1N4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nudcd3Q8R1N4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nudcd3Q8R1N4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nudcd3Q8R1N4 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nudcd3Q8R1N4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nudcd3Q8R1N4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms