Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Zcchc9Q8R1J3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Zcchc9Q8R1J3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.64■□□□□ 0.42
Zcchc9Q8R1J3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Zcchc9Q8R1J3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Timm23-208ENSMUST00000226683 750 ntBASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Zcchc9Q8R1J3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Zcchc9Q8R1J3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.61■□□□□ 0.41
Zcchc9Q8R1J3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Zcchc9Q8R1J3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms