Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.65■■□□□ 1.06
Sf3a1Q8K4Z5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sf3a1Q8K4Z5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sf3a1Q8K4Z5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sf3a1Q8K4Z5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sf3a1Q8K4Z5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sf3a1Q8K4Z5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sf3a1Q8K4Z5 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sf3a1Q8K4Z5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sf3a1Q8K4Z5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sf3a1Q8K4Z5 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Gm37292-201ENSMUST00000192062 758 ntBASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sf3a1Q8K4Z5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Gm37820-201ENSMUST00000194021 2147 ntBASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sf3a1Q8K4Z5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Gm11643-201ENSMUST00000119578 864 ntBASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Gm43183-201ENSMUST00000200632 547 ntBASIC21.59■■□□□ 1.05
Sf3a1Q8K4Z5 Idnk-204ENSMUST00000226010 1898 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms